Tissue immunology atlas
Tissues as immune ecosystems
Browse barrier systems, resident cells, microbiome interactions, neuroimmune inputs, cytokine environments, and metabolic constraints.
Gut Immune Ecosystem
tissueTolerance-dominant barrier system shaped by microbiome metabolites, epithelial alarmins, and antigen flux
Lung Immune Ecosystem
tissueAir-exposed barrier where epithelial alarmins, macrophage tone, and type 2 circuits regulate airway reactivity
Brain and CNS Immune Ecosystem
tissuePrivileged but responsive neuroimmune compartment governed by microglia, barriers, and sickness signaling
Skin Immune Ecosystem
tissueNeurovascular barrier where keratinocytes, mast cells, sensory nerves, and resident memory cells shape itch and repair
Adipose Immune Ecosystem
tissueMetabolic immune niche where nutrient excess, hypoxia, macrophages, and fibrosis reshape systemic inflammation
Liver Immune Ecosystem
tissuePortal immune filter balancing gut-derived tolerance, metabolic stress, acute phase response, and fibrosis
Vascular Immune Ecosystem
tissueEndothelial interface controlling leukocyte trafficking, thromboinflammation, permeability, and systemic cytokine distribution
Lymphoid Tissue Immune Ecosystem
tissueOrganized decision architecture for antigen presentation, clonal selection, germinal centers, and memory formation
Bone Marrow Immune Ecosystem
tissuePrimary hematopoietic niche where immune supply, plasma-cell survival, trained myeloid output, and inflammatory demand are coupled
Skeletal Osteoimmune Ecosystem
tissueBone as an immune-active remodeling organ linking osteoclasts, osteoblasts, marrow niches, inflammation, sex hormones, and mineral metabolism
Spleen Immune Ecosystem
tissueBlood-filtering immune organ coordinating encapsulated-bacteria defense, red-pulp macrophages, marginal-zone B cells, and systemic inflammatory surveillance
Mucosal Lymphoid Ecosystem
tissueTonsils, adenoids, Peyer's patches, and MALT as antigen-sampling hubs for IgA, tolerance, allergy, and barrier memory
Thymus Immune Ecosystem
tissueCentral tolerance and T-cell education organ where endocrine signals, epithelial niches, and selection thresholds shape the T-cell repertoire
Endocrine Immune Ecosystem
tissueHormone-producing organs as immune-modulating tissues linking HPA tone, thyroid signaling, insulin biology, gonadal hormones, and inflammatory thresholds